Python/Bottleneck

Introduction

Bottleneck is a collection of fast NumPy numpy array functions written in Cython, for Python including functions such as:

  • median()
  • nanmedian()
  • rankdata()
  • ss()
  • nansum()
  • nanmin()
  • nanmax()
  • nanmean()
  • nanstd()
  • nanargmin()
  • nanargmax()
  • nanrankdata()
  • nanvar()
  • partsort()
  • argpartsort()
  • replace()
  • nn()
  • anynan()
  • allnan()
  • move_sum()
  • move_nansum()
  • move_mean()
  • move_nanmean()
  • move_median()
  • move_std()
  • move_nanstd()
  • move_min()
  • move_nanmin()
  • move_max()
  • move_nanmax()

Example job scripts

None required as not intended as part of an HPC workload.

Web Page

Official website

Versions

0.8.0

Flavours

py27/1

Architecture

x86_64

Group
module load site-local
Build Details

Compiled with:

Usage
module load python/bottleneck/0.8.0/py27/1
Example Job Scripts

None yet.

Status

Partially tested.